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We have 2 hotels in Stony Brook.

 
 
Three Village Inn Star Rating 3        
150 Main St.

Built in 1751, this upscale colonial inn overlooking Stony Brook Harbor is a 7-minute walk from the historic Stony Brook Grist Mill and a 13-minute walk from the Long Island Museum of American Art.Elegant rooms in the main house and 6 cottages offer free Wi-Fi, flat-screen TVs and hardwood floors; some have fireplaces, sitting areas and water views.Free hot breakfast is served in a casual wood-beamed tavern.
Hilton Garden Inn Stony Brook Star Rating 3        
1 Circle Road

Located on Stony Brook University's campus and across the street from Stony Brook University Hospital, this contemporary hotel is a 4-minute drive to Long Island Railroad's Stony Brook Station.Flat-screen TVs, microwaves, minifridges and free WiFi are offered in each room, as well as upscale decor and custom-designed beds. Suites add separate living areas and pull-out sofas.
 
 
More on Stony Brook .
 
Stony Brook is a hamlet and census - designated place in the Town of Brookhaven in Suffolk County, New York, on the North Shore of Long Island.